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Home Meal Type Snacks
5
/5
40 minutes minutes

Lemon Chia Yogurt Muffins

Nut Free Nut Free Freezer Friendly Freezer Meal Prep Meal Prep
Jump to Recipe
By: Annie8 Comments
Posted: 12/4/20 Updated: 12/4/20

This post may contain affiliate links. Please read our disclosure policy.

Tender, slightly sweet, and full of citrus flavor, these lemon chia yogurt muffins are a healthier alternative to lemon poppyseed muffins! Made with applesauce and greek yogurt, they are free from oil and only 148 calories each.

Muffins are one of my favorite baking projects, because you can make them so much healthier with a few simple swaps! From healthy blueberry muffins to cinnamon rhubarb muffins to these lemon chia muffins, I like to have a batch in my freezer at all times!

Lemon Chia Yogurt Muffins cooling on wire rack with lemon slices

These muffins are the perfect way to indulge in your lemon poppyseed muffin cravings, without overdoing it. I think you're going to love them!

Reasons you'll ♡ lemon chia yogurt muffins

  • they are simple to prepare in a single bowl
  • they are oil free, yet tender and moist
  • they are filled with bright, citrussy flavor, and perfect with a cup of tea

Recipe video

Watch the video below to see exactly how I prepped this recipe. It’s so easy! You can find more of my recipe videos on my YouTube channel.

Don't forget to pin this post to save it for later!

ingredients required to make lemon chia yogurt muffins

One bowl for easy prep

When it comes to making muffins, one bowl is where it's at, and I'm happy to report that these lemon chia muffins can be mixed up in a single bowl. Start by whisking together the applesauce, greek yogurt and brown sugar, then stir in buttermilk, egg, vanilla and lemon juice.

Add the dry ingredients, and mix until *just* combined, and the final step is to fold in the lemon zest and chia seeds.

No buttermilk?

No problem! If you have regular milk and some lemon juice on hand, you can make a pretty close equivalent. Check out how to make buttermilk.

A kitchen scale is your best friend

Not only does a kitchen scale ensure that you don't over-measure your flour (never scoop it, but fluff, spoon, then level OR simply weigh it on a scale), but it also means that you won't have to wash any measuring cups!

Simply place your bowl on the scale, then measure out exactly what you need. This is the BEST, particularly with sticky ingredients like greek yogurt, which are finicky to get into and out of measuring cups.

Avoid paper liners

An important thing to note about these lemon muffins is that they will stick to paper liners. Instead, you can spray the muffin tin well with oil, use parchment liners, or purchase reusable silicone muffin liners. Using these tricks, I haven’t had any issues with the muffins sticking.

Find my favorite muffin liners in my shop!

collage image of lemon chia yogurt muffin batter

Ingredient swaps

  • flour- this recipe uses a mix of all purpose and whole wheat flour. You can either use 2 cups of regular all purpose flour (250 g), or 2 cups of white whole wheat flour (250 g). I do not recommend using 2 cups of whole wheat flour as it can be dense and gummy. I do not know if gluten-free, or any other alternative flours, will work in this recipe.
  • lemon- feel free to swap the lemon zest and juice for your favorite citrus- lime or orange could work well in this recipe
  • chia seeds- you may swap for poppyseeds, or even some chopped nuts (walnuts might add a nice crunch). For nuts use ¼-1/2 cup.
  • fruit- these muffins could be good with some berries added in- cranberries and blueberries both pair nicely with lemon. Add in 1 cup of berries (if they are frozen, do not thaw first) when you add the chia seeds.

Storage tips

Room temperature

Lemon chia muffins may be stored at room temperature in an air tight container for up to 3 days

To freeze

To freeze, cool completely, then add to a heavy duty freezer bag. Suck the air out of the bag using a straw and freeze for up to 1 month

For a plastic-free option, you may loosely wrap in parchment paper and store in a meal prep container for up to 1 month.

Check out my favorite freezer containers!

lemon chia yogurt muffins in baking pan before and after baking

More muffins + snacks

  • Easy Baked Oatmeal Muffins
  • 7 Healthy Breakfast Egg Muffins
  • Fudgy Black Bean Brownies
  • 7 No Bake Granola Bars
  • Healthy Strawberry Apple Crumble Muffins
  • Coconut Carrot Lentil Muffins

Did you make this? Tag me on social @sweetpeasandsaffron and be sure to leave a comment and rate the recipe!

overhead shot of lemon chia yogurt muffins cooling on wire rack

Lemon Chia Yogurt Muffins

5 from 4 votes
Prep Time: 20 minutes mins
Cook Time: 20 minutes mins
Total Time: 40 minutes mins
Print Rate
Tender, slightly sweet, and full of citrus flavor, these lemon chia muffins are a healthier alternative to lemon poppyseed muffins! Made with applesauce and greek yogurt, they are free from oil and only 148 calories each.
13

Ingredients

  • 1 cup all purpose flour 125g; fluffed, spooned & levelled; see note 1
  • 1 cup whole wheat flour 125g; fluffed, spooned & levelled
  • 3 teaspoons baking powder
  • ½ teaspoon salt
  • ⅔ cup applesauce unsweetened
  • ⅓ cup greek yogurt
  • ½ cup brown sugar
  • 1 cup buttermilk see note 3
  • 1 egg
  • 1 teaspoon vanilla
  • 2 tablespoons lemon juice
  • 2 lemons zested; see note 2
  • 2 tablespoons chia seeds
  • ¼ cup shredded coconut sweetened or unsweetened; for tops

Instructions 

  • Pre-heat oven to 400F. Distribute parchment muffin liners (see note) in a standard-sized muffin tray.
  • In a large bowl, combine applesauce, greek yogurt and brown sugar. Whisk until no lumps remain. Stir in buttermilk, egg, vanilla and lemon juice.
    wet ingredients for lemon chia muffins in bowl
  • Add the flours, baking powder and salt on top of the wet ingredients. Mix until *just* combined.
  • Fold in the lemon zest and chia seeds.
    lemon chia muffin batter in bowl
  • Spoon batter evenly into muffin tray. Sprinkle the tops with coconut.
    unbaked lemon chia muffins in muffin pan
  • Bake for 18-22 minutes, until edges brown and a toothpick comes out clean.
    baked lemon chia yogurt muffins in muffin pan

Tips:

1- you may use 2 cups (250 g) all purpose flour, or 2 cups (250 g) white whole wheat flour, or a mix of all purpose and whole wheat (as written). Do not use 2 full cups of whole wheat flour as the muffins end up dense and gummy.
2- roughly ⅓ cup loosely packed lemon zest
3- if you do not have buttermilk, you can make your own using this recipe.
Muffin liners
This recipe works with silicone and parchment liners but not with paper liners. Alternatively, you can spray muffin tins generously and pop the muffins out when warm.
Storage
After baking, cool completely on a wire rack. Transfer to an air tight container or bag and store at room temperature for up to 3 days.
To freeze-cool completely, then add to a heavy duty freezer bag. Suck the air out of the bag using a straw and freeze for up to 1 month
Variations
  • citrus- swap for lime or orange zest
  • chia seeds- swap for poppyseeds or ¼ to ½ cup chopped nuts
  • fruit- consider adding in 1 cup of fresh or frozen blueberries or cranberries
 

Video

Nutrition Information

Serving: 1muffin, Calories: 140kcal, Carbohydrates: 26g, Protein: 4g, Fat: 2g, Saturated Fat: 1g, Cholesterol: 15mg, Sodium: 42mg, Fiber: 3g, Sugar: 11g
Author: Annie Holmes
Course: Snack
Cuisine: American

© Sweet Peas & Saffron - Content and photographs are copyright protected. Sharing of this recipe is both encouraged and appreciated. Copying and/or pasting full recipes to any social media is strictly prohibited.

Did You Make This?Don't forget to leave a review below, and tag us on Instagram using @SweetPeasAndSaffron or #sweetpeasandsaffron
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Reader Interactions

5 from 4 votes (2 ratings without comment)

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Recipe Rating




  1. Bev Gunn says

    Posted on 11/2/18 at Posted on 11/2/18

    What kind of conversion would you do to make these non-gluten frienkly? I am just finally admitting that is my stomach problem for the last couple of years! thanks.

    Reply
    • Denise says

      Posted on 11/10/18 at Posted on 11/10/18

      Hi Bev! Unfortunately I'm not very experienced with gluten-free baking. I have used Bob's Red Mill 1:1 GF flour in past recipes with success but I really can't say for sure if it will work in this recipe without further testing.

      Reply
  2. Keriann Eklund says

    Posted on 10/29/18 at Posted on 10/29/18

    5 stars
    Love!! I have been on a healthy eating diet/regime for the last 7 months, and these muffins, along with your easy baked oatmeal muffins, are my first real dip back into baked goods. I LOVE THESE muffins! I did half topped with coconut and half topped with blueberries, for my daughter who does not like coconut, and they were devoured. I also adjusted sugar to 1/4 cup, and they are still sweet enough according to my picky husband. I brought the LOs into school for my fellow teachers to enjoy, and they were gone in minutes (and they were in good competition with some free Halloween treats). I will be making again!!

    Reply
    • Denise says

      Posted on 10/29/18 at Posted on 10/29/18

      I'm so happy you enjoyed!! Thanks for sharing your comments!

      Reply
  3. Jen says

    Posted on 11/5/17 at Posted on 11/5/17

    These muffins look amazing! Do I have to use buttermilk? I will use it but I typically don’t use a lot of buttermilk. Mainly use coconut or almond milk around the house. And do you have a recommendation for the best alternative flour choice?

    Reply
    • Denise says

      Posted on 11/9/17 at Posted on 11/9/17

      Hi Jen! Sometimes I don't use buttermilk, I just use whatever dairy milk I have on hand and add a squeeze of lemon...let it sit for 5-10 min until thickened slightly, and that does the trick 🙂

      Reply
  4. Victoria Kirby says

    Posted on 7/20/17 at Posted on 7/20/17

    5 stars
    Just lovely!

    Reply
    • Denise says

      Posted on 7/30/17 at Posted on 7/30/17

      Thanks so much, Victoria! <3

      Reply

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Hi, I'm Annie

Meal prep took me from feeling constantly stressed out about meals to cool, collected and in control. I want to share this amazing and transformational habit with you, so you can feel in control, too! Read more ...

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